Cell-based assays Cell-based assays

CellReporter system offers a multi-application platform that quantifies the response of individual cells using cell-based assays. Heterogeneous populations can be screened and analyzed, data visualized and exported, using a flexible, intuitive workflow.

The system supports a variety of cell-based assays including: apoptosis, cell cycle analysis, cell differentiation, cell proliferation, cytotoxicity, lipid accumulation, mitotic index, protein translocation, reporter gene expression and cell viability.

Cellular responses - quantification of apoptosis induction

Screening and quantification of apoptosis induction

Image acquisition, accurate identification of nuclei

MCF-7 cells, pro-apoptotic anisomycin, induce apoptosis,
Untreated (non-apoptotic) MCF-7 cells imaged under white light
apoptotic MCF-7 cell death, Annexin V, stimulation of apoptosis
Untreated MCF-7 cells imaged using fluorescence (DAPI)

Data analysis

  • Mean fluorescence used to gate cells into three populations - viable (blue), apoptopic (yellow) and dead cells (pink)
all-cell dye Hoechst 33342, dead-cell dye propidium iodide, annexin V apoptosis
Untreated cells
Annexin V apoptosis, quantify necrotic cells
All cells
  • Review individual cells in high resolution images for each fluorescent channel
Annexin V apoptosis assay, Annexin V apoptosis kits
User defined analysis in the scatter plots is represented in the images

Report

  • Plate Overview shows number of cells and proportion of apoptotic cells per well
Annexin V propidium iodide, Annexin V FITC, Annexin V assay
evaluate apoptosis with Annexin V
  • Assay principle:
    • Apoptosis induced by Anisomycin
    • Hoechst 33342 binds to DNA of all cell nuclei
    • Propidium iodide enters only dead cells
    • Fluorescent Annexin V binds to altered membrane of apoptotic cells
Annexin V protocol, apoptosis induction protocol, apoptosis protocol

Further information

Cellular responses - assess apoptosis through morphology

Assessment of apoptosis through changes in cell nuclear morphology

Image acquisition, accurate identification of nuclei

Untreated (non-apoptotic) HeLa cells
Treated (apoptotic) HeLa cells showing condensed, fragmented chromatin

Data analysis

  • Gating of non-apoptotic and apoptotic populations
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Histogram: distribution of standard deviations of nuclear intensities in DAPI channel.

Analysis within histogram is represented in the images.

Report

  • Plate Overview reveals distribution of apoptotic cells per well
Diameter of pie chart = cell number

Slices in pie chart = apoptotic:non-apoptotic cells
  • Assay principle:
    • Hoechst 33342 dye binds to DNA of all cells
    • Apoptotic cells distinguished by condensation/ fragmentation status of chromatin in the nucleus
    • Apoptosis induced by Staurosporine and Anisomycin
Non-apoptotic cell with decondensed, non-fragmented nucleus
Apoptotic cell with condensed, fragmented nucleus

Further information

Cytotoxic response - determine 'dead-cell' population

Assessment of ‘dead-cell’ dye uptake following cytotoxic challenge

Image acquisition, accurate identification of nuclear and cytoplasmic regions

Nucleus of all cells stained with Hoechst 33342
Nucleus of dead cells stained with propidium iodide

Data analysis

  • Cell population gated into sub-groups: live / dead
Histogram plot: distribution of nuclear fluorescence in Texas Red channel

Report and export data

  • Plate Overview reveals distribution of dead cells within each well
  • Export to create a dose response curve
Diameter of pie chart = cell number

Slices in pie chart = live:dead cells
Dose response curve from exported data
  • Assay principle:
    • ‘All-cell’ dye (Hoechst 33342) binds to DNA of all cells
    • ‘Dead-cell’ dye (propidium iodide) crosses plasma membrane of unhealthy or dead cells and binds to nuclei

Further information

Cell viability - determine 'live-cell' population

Assessment of cytoplasmic ‘live-cell’ dye hydrolysis following cytotoxic challenge

Image acquisition, accurate identification of nuclear and cytoplasmic regions

Nucleus of all cells stained with Hoechst 33342
Fluorescent (viable) cells

Data analysis

  • Cell population gated into sub-groups: viable/non-viable
Histogram plot shows distribution of cytoplasmic fluorescence in the FITC channel

Report and export data

  • Plate Overview reveals distribution of cell viability across plate
  • Export to create a dose response curve
Diameter of pie chart = cell number

Slices in pie chart = viable:non-viable cells
Dose response curve from exported data
  • Assay principle:
    • Hoechst 33342 dye binds to DNA of all cells
    • Nuclei accurately identified in DAPI channel
    • FITC channel used to quantify fluorescent ‘live-cell’ dye

Further information

Cellular activation state - determine protein localization

Assessment of NF-ĸß protein localization

Image acquisition and accurate identification of nuclear and cytoplasmic regions

protein localization, protein translocation, cellular activation assay
Nucleus of all cells stained with Hoechst 33342
protein localization, protein translocation, cellular activation assay
All cells stained with anti – NF- ĸß antibody revealing NF- ĸß localization

Data analysis

  • Determine ratio of nuclear:cytoplasmic fluorescence - gating of stimulated and unstimulated cells
NF-kB antibody, NF-kB localization assay, cellular activation assay

Histogram: distribution of Cy3 interior mean fluorescence: Cy3 exterior mean fluorescence.

Fixed HeLa cells. Analysis within histogram is represented in the images.

Report

  • Plate Overview reveals distribution of stimulated cells per well
measure cellular activation
Diameter of pie chart = cell number

Slices in pie chart = stimulated:unstimulated cells
  • Assay principle:
    • Hoechst 33342 dye binds to DNA of all cells
    • Nuclei accurately identified in DAPI channel
    • Cy3 channel is used to quantify fluorescent anti-NF-ĸß in the area of each nucleus

Cell proliferation - determine cell cycle profile

Assessment of cell cycle via changes in nuclear DNA content

Image acquisition, accurate identification of nuclei

Fluorescent imaging
Nuclei identified

Data analysis

  • Heterogeneous cell population gated into 3 sub-groups

Histogram: distribution of total nuclear intensities in Texas Red channel

Analysis within histogram represented in images

  • Gating of sub-groups further sub-divides cell population
G2 cells (4n DNA, de-condensed nuclei) distinguished from pre-anaphase mitotic cells (4n DNA, condensed nuclei)
Post-metaphase mitotic cells (2n DNA, condensed nuclei) distinguished from G1 cells (2n DNA, de-condensed nuclei)

Report

  • Plate Overview reveals cell cycle distribution of cells within each well
Diameter of pie chart = cell number

Slices in pie chart = proportion of cells in each cell cycle phase
  • Assay principle: Quantify DNA content per cell using propidium iodide to bind DNA in fixed cells
Changes in nuclear DNA throughout the cell cycle

Further information

Bead-based assaysBead-based assays

In comparison with conventional techniques, the CellReporter system supports a broader range of applications utilizing the bead-based assay format. The assay workflow is also less time-consuming, requiring only a single incubation step, no wash steps and a simple, intuitive workflow to screen, analyze, visualize and export data.

Antibody quantification - comparison of bead-based assays to conventional ELISA

Quantification of IgG production

Time-saving, simplified workflow

Replace time-consuming ELISA assay with one easy incubation step (no washing required)

Image acquisition, accurate identification of beads

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Wells are imaged
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Beads are identified
Enlarge
Accurate overlay for bead-specific quantification of IgG

Data analysis

Plate Overview illustrates a heat map representation of the distribution of fluorescent bead intensity per well across the plate
  • Mean fluorescence intensity per bead per well determined by CellReporter software

Report

  • Standard curve shows comparable results between the homogeneous bead assay and an ELISA approach

Conclusion

  • IgG levels were accurately quantified by identification of individual beads and determination of their fluorescence
  • The sensitivity and dynamic range of this approach is comparable to conventional ELISA but saves time - only a single incubation step and no wash steps are required

Further information

Brochure
Preview
CellReporter™
Quantification of cellular responses
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Recent publications
Technical note: Analyzing Cell- and Bead-Based Assays
GEN Tech Notes: May 1, 2011 (Vol. 31, No. 9)
Paper that demonstrates how CellReporter offers a multipurpose solution for accurate and quantitative results for cell- and bead-based assays.
Recorded webinars

Phenotypic Screening to Identify Cures for the Deadliest Poison

Dr. Tobin Dickerson, The Scripps Research Institute, San Diego, CA

Dr Dickerson discusses the development of a whole cell based assay for Botulinum neurotoxin (BoNT) inhibitors based on the new CellReporter™ multi-application platform. Listen now >

Accelerated high content screening and homogeneous quantification of soluble IgG levels

Dr Alasdair Robertson, Head of Biology R&D, Genetix Limited

Dr Robertson demonstrates how utilizing the CellReporter™ system's quantitative approach to assessing IgG levels can save time and simplify workflow compared to conventional methods such as FMAT®.

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